Python
18.10
Deployment
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Abstraction
askomics package
Python
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B
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C
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D
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E
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F
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G
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H
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I
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J
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K
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N
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O
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Q
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U
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V
A
AbstractedEntity (class in askomics.libaskomics.integration.AbstractedEntity)
AbstractedRelation (class in askomics.libaskomics.integration.AbstractedRelation)
add_apikey() (askomics.libaskomics.rdfdb.SparqlQueryAuth.SparqlQueryAuth method)
add_endpoint() (askomics.ask_view.AskView method)
add_galaxy() (askomics.libaskomics.rdfdb.SparqlQueryAuth.SparqlQueryAuth method)
(askomics.libaskomics.Security.Security method)
admin_user() (askomics.libaskomics.Security.Security method)
api_key() (askomics.ask_view.AskView method)
askomics (module)
askomics.ask_view (module)
askomics.libaskomics (module)
askomics.libaskomics.DatabaseConnector (module)
askomics.libaskomics.EndpointManager (module)
askomics.libaskomics.GalaxyConnector (module)
askomics.libaskomics.integration (module)
askomics.libaskomics.integration.AbstractedEntity (module)
askomics.libaskomics.integration.AbstractedRelation (module)
askomics.libaskomics.JobManager (module)
askomics.libaskomics.ParamManager (module)
askomics.libaskomics.rdfdb (module)
askomics.libaskomics.rdfdb.FederationQueryLauncher (module)
askomics.libaskomics.rdfdb.MultipleQueryLauncher (module)
askomics.libaskomics.rdfdb.QueryLauncher (module)
askomics.libaskomics.rdfdb.SparqlQueryAuth (module)
askomics.libaskomics.rdfdb.SparqlQueryBuilder (module)
askomics.libaskomics.rdfdb.SparqlQueryGraph (module)
askomics.libaskomics.rdfdb.SparqlQueryStats (module)
askomics.libaskomics.Security (module)
askomics.libaskomics.source_file (module)
askomics.libaskomics.source_file.SourceFile (module)
askomics.libaskomics.source_file.SourceFileBed (module)
askomics.libaskomics.source_file.SourceFileGff (module)
askomics.libaskomics.source_file.SourceFileTsv (module)
askomics.libaskomics.source_file.SourceFileTtl (module)
askomics.libaskomics.source_file.SourceFileURL (module)
askomics.libaskomics.SourceFileConvertor (module)
askomics.libaskomics.TripleStoreExplorer (module)
askomics.libaskomics.utils (module)
askomics.upload (module)
askomics.views (module)
AskView (class in askomics.ask_view)
B
Bool() (askomics.libaskomics.ParamManager.ParamManager static method)
build_query_on_the_fly() (askomics.libaskomics.rdfdb.SparqlQueryBuilder.SparqlQueryBuilder method)
build_recursive_block() (askomics.libaskomics.TripleStoreExplorer.TripleStoreExplorer method)
build_sparql_query_from_json() (askomics.libaskomics.TripleStoreExplorer.TripleStoreExplorer method)
C
cache (askomics.libaskomics.utils.HaveCachedProperties attribute)
cached_property (class in askomics.libaskomics.utils)
category_values (askomics.libaskomics.source_file.SourceFileTsv.SourceFileTsv attribute)
check_email() (askomics.libaskomics.Security.Security method)
check_email_in_database() (askomics.libaskomics.Security.Security method)
check_email_password() (askomics.libaskomics.Security.Security method)
check_email_presence() (askomics.libaskomics.rdfdb.SparqlQueryAuth.SparqlQueryAuth method)
check_galaxy() (askomics.libaskomics.rdfdb.SparqlQueryAuth.SparqlQueryAuth method)
(askomics.libaskomics.Security.Security method)
check_galaxy_instance() (askomics.libaskomics.GalaxyConnector.GalaxyConnector method)
check_password_length() (askomics.libaskomics.Security.Security method)
check_passwords() (askomics.libaskomics.Security.Security method)
check_username_in_database() (askomics.libaskomics.Security.Security method)
check_username_password() (askomics.libaskomics.Security.Security method)
check_username_presence() (askomics.libaskomics.rdfdb.SparqlQueryAuth.SparqlQueryAuth method)
checkAdminSession() (askomics.ask_view.AskView method)
checkAuthSession() (askomics.ask_view.AskView method)
checkuser() (askomics.ask_view.AskView method)
ckeck_key_belong_user() (askomics.libaskomics.rdfdb.SparqlQueryAuth.SparqlQueryAuth method)
(askomics.libaskomics.Security.Security method)
cleantmpdirectory() (askomics.ask_view.AskView method)
condition_query() (askomics.libaskomics.rdfdb.SparqlQueryStats.SparqlQueryStats method)
connect_galaxy() (askomics.ask_view.AskView method)
convert_to_ttl() (askomics.libaskomics.source_file.SourceFileTtl.SourceFileTtl method)
create_endpoints_table() (askomics.libaskomics.DatabaseConnector.DatabaseConnector method)
create_galaxy_table() (askomics.libaskomics.DatabaseConnector.DatabaseConnector method)
create_integration_table() (askomics.libaskomics.DatabaseConnector.DatabaseConnector method)
create_query_table() (askomics.libaskomics.DatabaseConnector.DatabaseConnector method)
create_user_graph() (askomics.libaskomics.Security.Security method)
create_user_table() (askomics.libaskomics.DatabaseConnector.DatabaseConnector method)
custom_query() (askomics.libaskomics.rdfdb.SparqlQueryBuilder.SparqlQueryBuilder method)
D
DatabaseConnector (class in askomics.libaskomics.DatabaseConnector)
debug() (askomics.libaskomics.rdfdb.QueryLauncher.QueryLauncher_ method)
decode() (askomics.libaskomics.ParamManager.ParamManager static method)
decode_to_rdf_uri() (askomics.libaskomics.ParamManager.ParamManager static method)
deletCsv() (askomics.ask_view.AskView method)
delete() (askomics.upload.FileUpload method)
delete_apikey() (askomics.libaskomics.rdfdb.SparqlQueryAuth.SparqlQueryAuth method)
delete_endpoints() (askomics.ask_view.AskView method)
delete_galaxy() (askomics.libaskomics.rdfdb.SparqlQueryAuth.SparqlQueryAuth method)
(askomics.libaskomics.Security.Security method)
delete_graph() (askomics.ask_view.AskView method)
delete_uploaded_files() (askomics.ask_view.AskView method)
delete_user() (askomics.ask_view.AskView method)
(askomics.libaskomics.Security.Security method)
(askomics.libaskomics.rdfdb.SparqlQueryBuilder.SparqlQueryBuilder method)
deleteShortcut() (askomics.ask_view.AskView method)
deljob() (askomics.ask_view.AskView method)
dialect (askomics.libaskomics.source_file.SourceFileTsv.SourceFileTsv attribute)
disable() (askomics.libaskomics.EndpointManager.EndpointManager method)
disable_by_url() (askomics.libaskomics.EndpointManager.EndpointManager method)
done_integration_job() (askomics.libaskomics.JobManager.JobManager method)
done_query_job() (askomics.libaskomics.JobManager.JobManager method)
E
empty_database() (askomics.ask_view.AskView method)
enable() (askomics.libaskomics.EndpointManager.EndpointManager method)
enable_endpoints() (askomics.ask_view.AskView method)
encode() (askomics.libaskomics.ParamManager.ParamManager static method)
encode_to_rdf_uri() (askomics.libaskomics.ParamManager.ParamManager static method)
EndpointError
EndpointManager (class in askomics.libaskomics.EndpointManager)
execute_sql_query() (askomics.libaskomics.DatabaseConnector.DatabaseConnector method)
F
FederationQueryLauncher (class in askomics.libaskomics.rdfdb.FederationQueryLauncher)
file_get_contents() (askomics.libaskomics.source_file.SourceFileTtl.SourceFileTtl method)
fileinfo() (askomics.upload.FileUpload method)
filepath() (askomics.upload.FileUpload method)
FileUpload (class in askomics.upload)
format_results_csv() (askomics.libaskomics.rdfdb.QueryLauncher.QueryLauncher_ method)
func (askomics.libaskomics.utils.cached_property attribute)
G
GalaxyConnector (class in askomics.libaskomics.GalaxyConnector)
get() (askomics.upload.FileUpload method)
get_abstraction() (askomics.libaskomics.source_file.SourceFileBed.SourceFileBed method)
(askomics.libaskomics.source_file.SourceFileGff.SourceFileGff method)
(askomics.libaskomics.source_file.SourceFileTsv.SourceFileTsv method)
get_abstraction_positionable_entity() (askomics.libaskomics.rdfdb.SparqlQueryGraph.SparqlQueryGraph method)
get_admin_blocked_by_email() (askomics.libaskomics.rdfdb.SparqlQueryAuth.SparqlQueryAuth method)
(askomics.libaskomics.Security.Security method)
get_admin_blocked_by_username() (askomics.libaskomics.rdfdb.SparqlQueryAuth.SparqlQueryAuth method)
(askomics.libaskomics.Security.Security method)
get_admins_emails() (askomics.libaskomics.rdfdb.SparqlQueryAuth.SparqlQueryAuth method)
(askomics.libaskomics.Security.Security method)
get_all_taxons() (askomics.libaskomics.rdfdb.SparqlQueryGraph.SparqlQueryGraph method)
get_attr_of_classes() (askomics.libaskomics.rdfdb.SparqlQueryStats.SparqlQueryStats method)
get_cache() (askomics.libaskomics.utils.HaveCachedProperties method)
get_cached_properties() (askomics.libaskomics.utils.HaveCachedProperties class method)
get_class_info_from_abstraction() (askomics.libaskomics.rdfdb.SparqlQueryGraph.SparqlQueryGraph method)
get_content_ttl() (askomics.libaskomics.source_file.SourceFileGff.SourceFileGff method)
get_data_from_galaxy() (askomics.ask_view.AskView method)
get_datasets_and_histories() (askomics.libaskomics.GalaxyConnector.GalaxyConnector method)
get_delete_metadatas_of_graph() (askomics.libaskomics.rdfdb.SparqlQueryBuilder.SparqlQueryBuilder method)
get_delete_query_string() (askomics.libaskomics.rdfdb.SparqlQueryBuilder.SparqlQueryBuilder method)
get_directory() (askomics.libaskomics.ParamManager.ParamManager method)
get_domain() (askomics.libaskomics.integration.AbstractedRelation.AbstractedRelation method)
get_domain_knowledge() (askomics.libaskomics.source_file.SourceFileBed.SourceFileBed method)
(askomics.libaskomics.source_file.SourceFileGff.SourceFileGff method)
(askomics.libaskomics.source_file.SourceFileTsv.SourceFileTsv method)
get_drop_named_graph() (askomics.libaskomics.rdfdb.SparqlQueryBuilder.SparqlQueryBuilder method)
get_entities() (askomics.libaskomics.source_file.SourceFileGff.SourceFileGff method)
get_file_content() (askomics.libaskomics.GalaxyConnector.GalaxyConnector method)
get_file_size() (askomics.upload.FileUpload method)
get_galaxy_file_content() (askomics.ask_view.AskView method)
get_galaxy_infos() (askomics.libaskomics.rdfdb.SparqlQueryAuth.SparqlQueryAuth method)
(askomics.libaskomics.Security.Security method)
get_graph_of_user() (askomics.libaskomics.rdfdb.SparqlQueryBuilder.SparqlQueryBuilder method)
get_headers_by_file (askomics.libaskomics.source_file.SourceFileTsv.SourceFileTsv attribute)
get_if_positionable() (askomics.libaskomics.rdfdb.SparqlQueryGraph.SparqlQueryGraph method)
get_isa_relation_entities() (askomics.libaskomics.rdfdb.SparqlQueryGraph.SparqlQueryGraph method)
get_label() (askomics.libaskomics.integration.AbstractedRelation.AbstractedRelation method)
get_my_infos() (askomics.ask_view.AskView method)
get_number_of_classes() (askomics.libaskomics.rdfdb.SparqlQueryStats.SparqlQueryStats method)
get_number_of_entities() (askomics.libaskomics.rdfdb.SparqlQueryStats.SparqlQueryStats method)
get_number_of_lines() (askomics.libaskomics.source_file.SourceFile.SourceFile method)
get_number_of_subgraph() (askomics.libaskomics.rdfdb.SparqlQueryStats.SparqlQueryStats method)
get_number_of_triples() (askomics.libaskomics.rdfdb.SparqlQueryStats.SparqlQueryStats method)
get_number_of_users() (askomics.libaskomics.rdfdb.SparqlQueryAuth.SparqlQueryAuth method)
(askomics.libaskomics.Security.Security method)
get_owner_apikey() (askomics.libaskomics.rdfdb.SparqlQueryAuth.SparqlQueryAuth method)
get_owner_of_apikey() (askomics.libaskomics.Security.Security method)
get_param() (askomics.libaskomics.ParamManager.ParamManager method)
get_password_with_email() (askomics.libaskomics.rdfdb.SparqlQueryAuth.SparqlQueryAuth method)
get_password_with_username() (askomics.libaskomics.rdfdb.SparqlQueryAuth.SparqlQueryAuth method)
get_prefix_uri() (askomics.libaskomics.rdfdb.SparqlQueryGraph.SparqlQueryGraph method)
(askomics.libaskomics.TripleStoreExplorer.TripleStoreExplorer method)
get_preview_data() (askomics.libaskomics.source_file.SourceFileTsv.SourceFileTsv method)
get_preview_ttl() (askomics.libaskomics.source_file.SourceFileTtl.SourceFileTtl method)
get_public_abstraction_attribute_entity() (askomics.libaskomics.rdfdb.SparqlQueryGraph.SparqlQueryGraph method)
get_public_abstraction_category_entity() (askomics.libaskomics.rdfdb.SparqlQueryGraph.SparqlQueryGraph method)
get_public_abstraction_entity() (askomics.libaskomics.rdfdb.SparqlQueryGraph.SparqlQueryGraph method)
get_public_abstraction_relation() (askomics.libaskomics.rdfdb.SparqlQueryGraph.SparqlQueryGraph method)
get_public_graphs() (askomics.libaskomics.rdfdb.SparqlQueryGraph.SparqlQueryGraph method)
get_public_start_point() (askomics.libaskomics.rdfdb.SparqlQueryGraph.SparqlQueryGraph method)
get_random_string() (askomics.libaskomics.rdfdb.SparqlQueryAuth.SparqlQueryAuth static method)
(askomics.libaskomics.Security.Security static method)
get_range() (askomics.libaskomics.integration.AbstractedRelation.AbstractedRelation method)
get_rdf_directory() (askomics.libaskomics.ParamManager.ParamManager method)
get_rdf_user_directory() (askomics.libaskomics.ParamManager.ParamManager method)
get_rel_of_classes() (askomics.libaskomics.rdfdb.SparqlQueryStats.SparqlQueryStats method)
get_relation_type() (askomics.libaskomics.integration.AbstractedRelation.AbstractedRelation method)
get_sha256_pw() (askomics.libaskomics.Security.Security method)
get_source_files() (askomics.libaskomics.SourceFileConvertor.SourceFileConvertor method)
get_sparql_prefixes() (askomics.libaskomics.ParamManager.ParamManager method)
get_start_points() (askomics.libaskomics.TripleStoreExplorer.TripleStoreExplorer method)
get_strand() (askomics.libaskomics.source_file.SourceFileTsv.SourceFileTsv static method)
get_strand_faldo() (askomics.libaskomics.source_file.SourceFileTsv.SourceFileTsv static method)
get_subgraph_infos() (askomics.libaskomics.rdfdb.SparqlQueryStats.SparqlQueryStats method)
get_timestamp() (askomics.libaskomics.source_file.SourceFile.SourceFile method)
get_turtle() (askomics.libaskomics.integration.AbstractedEntity.AbstractedEntity method)
(askomics.libaskomics.integration.AbstractedRelation.AbstractedRelation method)
(askomics.libaskomics.source_file.SourceFileBed.SourceFileBed method)
(askomics.libaskomics.source_file.SourceFileGff.SourceFileGff method)
(askomics.libaskomics.source_file.SourceFileTsv.SourceFileTsv method)
get_turtle_prefixes() (askomics.libaskomics.ParamManager.ParamManager method)
get_turtle_template() (askomics.libaskomics.ParamManager.ParamManager method)
get_upload_directory() (askomics.libaskomics.ParamManager.ParamManager method)
get_uploaded_files() (askomics.ask_view.AskView method)
get_uri() (askomics.libaskomics.integration.AbstractedEntity.AbstractedEntity method)
(askomics.libaskomics.integration.AbstractedRelation.AbstractedRelation method)
get_user_abstraction_attribute_entity() (askomics.libaskomics.rdfdb.SparqlQueryGraph.SparqlQueryGraph method)
get_user_abstraction_category_entity() (askomics.libaskomics.rdfdb.SparqlQueryGraph.SparqlQueryGraph method)
get_user_abstraction_entity() (askomics.libaskomics.rdfdb.SparqlQueryGraph.SparqlQueryGraph method)
get_user_abstraction_relation() (askomics.libaskomics.rdfdb.SparqlQueryGraph.SparqlQueryGraph method)
get_user_csv_directory() (askomics.libaskomics.ParamManager.ParamManager method)
get_user_graph_infos_with_count() (askomics.libaskomics.rdfdb.SparqlQueryGraph.SparqlQueryGraph method)
get_user_id_by_username() (askomics.libaskomics.Security.Security method)
get_user_infos() (askomics.libaskomics.rdfdb.SparqlQueryAuth.SparqlQueryAuth method)
(askomics.libaskomics.Security.Security method)
get_user_start_point() (askomics.libaskomics.rdfdb.SparqlQueryGraph.SparqlQueryGraph method)
get_username() (askomics.libaskomics.Security.Security method)
get_username_by_email() (askomics.libaskomics.rdfdb.SparqlQueryAuth.SparqlQueryAuth method)
get_users_infos() (askomics.ask_view.AskView method)
(askomics.libaskomics.Security.Security method)
(askomics.libaskomics.rdfdb.SparqlQueryAuth.SparqlQueryAuth method)
get_value() (askomics.ask_view.AskView method)
getExternalServiceEndpoint() (askomics.libaskomics.rdfdb.SparqlQueryBuilder.SparqlQueryBuilder method)
getGraphUser() (askomics.libaskomics.rdfdb.SparqlQueryBuilder.SparqlQueryBuilder method)
getSparqlQueryInTextFormat() (askomics.ask_view.AskView method)
getUserAbstraction() (askomics.ask_view.AskView method)
(askomics.libaskomics.TripleStoreExplorer.TripleStoreExplorer method)
guess_csv_header_type() (askomics.ask_view.AskView method)
guess_file_type() (askomics.libaskomics.SourceFileConvertor.SourceFileConvertor static method)
guess_values_type() (askomics.libaskomics.source_file.SourceFileTsv.SourceFileTsv method)
H
HaveCachedProperties (class in askomics.libaskomics.utils)
header_sparql_config() (askomics.libaskomics.ParamManager.ParamManager method)
I
importShortcut() (askomics.ask_view.AskView method)
insert_data() (askomics.libaskomics.rdfdb.QueryLauncher.QueryLauncher method)
insert_metadatas() (askomics.libaskomics.source_file.SourceFile.SourceFile method)
intersperse_chain() (in module askomics.libaskomics.utils)
is_decimal() (askomics.libaskomics.source_file.SourceFileTsv.SourceFileTsv static method)
is_defined() (askomics.libaskomics.ParamManager.ParamManager method)
J
JobManager (class in askomics.libaskomics.JobManager)
K
key_id() (askomics.libaskomics.source_file.SourceFileTsv.SourceFileTsv method)
L
list_active_endpoints() (askomics.libaskomics.EndpointManager.EndpointManager method)
list_endpoints() (askomics.ask_view.AskView method)
(askomics.libaskomics.EndpointManager.EndpointManager method)
list_integration_jobs() (askomics.libaskomics.JobManager.JobManager method)
list_query_jobs() (askomics.libaskomics.JobManager.JobManager method)
list_user_graph() (askomics.ask_view.AskView method)
listjob() (askomics.ask_view.AskView method)
load_bed_into_graph() (askomics.ask_view.AskView method)
load_data() (askomics.libaskomics.rdfdb.QueryLauncher.QueryLauncher method)
load_data_from_file() (askomics.libaskomics.source_file.SourceFile.SourceFile method)
load_data_from_url() (askomics.libaskomics.source_file.SourceFileTtl.SourceFileTtl static method)
(askomics.libaskomics.source_file.SourceFileURL.SourceFileURL method)
load_data_into_graph() (askomics.ask_view.AskView method)
load_gff_into_graph() (askomics.ask_view.AskView method)
load_remote_data_into_graph() (askomics.ask_view.AskView method)
load_ttl_into_graph() (askomics.ask_view.AskView method)
lock_user() (askomics.ask_view.AskView method)
(askomics.libaskomics.Security.Security method)
log_user() (askomics.libaskomics.Security.Security method)
login() (askomics.ask_view.AskView method)
login_api() (askomics.ask_view.AskView method)
login_api_gie() (askomics.ask_view.AskView method)
logout() (askomics.ask_view.AskView method)
M
main() (in module askomics)
MultipleQueryLauncher (class in askomics.libaskomics.rdfdb.MultipleQueryLauncher)
my_view() (in module askomics.views)
N
nbUsers() (askomics.ask_view.AskView method)
NotEndpoint
O
open_bed() (askomics.libaskomics.source_file.SourceFileBed.SourceFileBed method)
options() (askomics.upload.FileUpload method)
P
ParamManager (class in askomics.libaskomics.ParamManager)
parse_results() (askomics.libaskomics.rdfdb.QueryLauncher.QueryLauncher_ method)
persist() (askomics.libaskomics.source_file.SourceFile.SourceFile method)
(askomics.libaskomics.source_file.SourceFileTtl.SourceFileTtl method)
persist_user() (askomics.libaskomics.Security.Security method)
pformat_generic_object() (in module askomics.libaskomics.utils)
post() (askomics.upload.FileUpload method)
prefix_lines() (in module askomics.libaskomics.utils)
prefix_uri() (askomics.ask_view.AskView method)
prepare_query() (askomics.libaskomics.rdfdb.SparqlQueryBuilder.SparqlQueryBuilder method)
preview_ttl() (askomics.ask_view.AskView method)
process_query() (askomics.libaskomics.rdfdb.FederationQueryLauncher.FederationQueryLauncher method)
(askomics.libaskomics.rdfdb.MultipleQueryLauncher.MultipleQueryLauncher method)
(askomics.libaskomics.rdfdb.QueryLauncher.QueryLauncher_ method)
Q
query_exemple() (askomics.libaskomics.rdfdb.SparqlQueryGraph.SparqlQueryGraph method)
QueryLauncher (class in askomics.libaskomics.rdfdb.QueryLauncher)
QueryLauncher_ (class in askomics.libaskomics.rdfdb.QueryLauncher)
R
remove_endpoint() (askomics.libaskomics.EndpointManager.EndpointManager method)
remove_job() (askomics.libaskomics.JobManager.JobManager method)
remove_prefix() (askomics.libaskomics.ParamManager.ParamManager method)
renew_apikey() (askomics.ask_view.AskView method)
(askomics.libaskomics.Security.Security method)
reset_cache() (askomics.libaskomics.utils.HaveCachedProperties method)
reverse_prefix() (askomics.libaskomics.ParamManager.ParamManager method)
S
save_endpoint() (askomics.libaskomics.EndpointManager.EndpointManager method)
save_integration_job() (askomics.libaskomics.JobManager.JobManager method)
save_query_job() (askomics.libaskomics.JobManager.JobManager method)
Security (class in askomics.libaskomics.Security)
send2galaxy() (askomics.ask_view.AskView method)
send_json_to_history() (askomics.libaskomics.GalaxyConnector.GalaxyConnector method)
send_mails() (askomics.libaskomics.ParamManager.ParamManager method)
send_to_history() (askomics.libaskomics.GalaxyConnector.GalaxyConnector method)
serverinformations() (askomics.ask_view.AskView method)
set_admin() (askomics.ask_view.AskView method)
(askomics.libaskomics.Security.Security method)
set_blocked() (askomics.libaskomics.Security.Security method)
set_cache() (askomics.libaskomics.utils.HaveCachedProperties method)
set_disabled_columns() (askomics.libaskomics.source_file.SourceFileTsv.SourceFileTsv method)
set_entities() (askomics.libaskomics.source_file.SourceFileGff.SourceFileGff method)
set_entity_name() (askomics.libaskomics.source_file.SourceFileBed.SourceFileBed method)
set_error_message() (askomics.libaskomics.JobManager.JobManager method)
set_forced_column_types() (askomics.libaskomics.source_file.SourceFileTsv.SourceFileTsv method)
set_galaxy() (askomics.libaskomics.Security.Security method)
set_headers() (askomics.libaskomics.source_file.SourceFileTsv.SourceFileTsv method)
set_key_columns() (askomics.libaskomics.source_file.SourceFileTsv.SourceFileTsv method)
set_param() (askomics.libaskomics.ParamManager.ParamManager method)
set_taxon() (askomics.libaskomics.source_file.SourceFileBed.SourceFileBed method)
(askomics.libaskomics.source_file.SourceFileGff.SourceFileGff method)
set_username_by_email() (askomics.libaskomics.Security.Security method)
setGraph() (askomics.libaskomics.source_file.SourceFile.SourceFile method)
setup_opener() (askomics.libaskomics.rdfdb.QueryLauncher.QueryLauncher_ method)
setupSPARQLWrapper() (askomics.libaskomics.rdfdb.QueryLauncher.QueryLauncher method)
(askomics.libaskomics.rdfdb.QueryLauncher.QueryLauncher_ method)
setUserDatastore() (askomics.libaskomics.rdfdb.QueryLauncher.QueryLauncher method)
(askomics.libaskomics.rdfdb.QueryLauncher.QueryLauncher_ method)
signup() (askomics.ask_view.AskView method)
source_files_overview() (askomics.ask_view.AskView method)
SourceFile (class in askomics.libaskomics.source_file.SourceFile)
SourceFileBed (class in askomics.libaskomics.source_file.SourceFileBed)
SourceFileConvertor (class in askomics.libaskomics.SourceFileConvertor)
SourceFileGff (class in askomics.libaskomics.source_file.SourceFileGff)
SourceFileSyntaxError
SourceFileTsv (class in askomics.libaskomics.source_file.SourceFileTsv)
SourceFileTtl (class in askomics.libaskomics.source_file.SourceFileTtl)
SourceFileURL (class in askomics.libaskomics.source_file.SourceFileURL)
SPARQLError
SparqlQueryAuth (class in askomics.libaskomics.rdfdb.SparqlQueryAuth)
SparqlQueryBuilder (class in askomics.libaskomics.rdfdb.SparqlQueryBuilder)
SparqlQueryGraph (class in askomics.libaskomics.rdfdb.SparqlQueryGraph)
SparqlQueryStats (class in askomics.libaskomics.rdfdb.SparqlQueryStats)
start_points() (askomics.ask_view.AskView method)
statistics() (askomics.ask_view.AskView method)
T
test_endpoint() (askomics.libaskomics.rdfdb.QueryLauncher.QueryLauncher_ method)
TripleStoreExplorer (class in askomics.libaskomics.TripleStoreExplorer)
U
update_admin_status() (askomics.libaskomics.rdfdb.SparqlQueryBuilder.SparqlQueryBuilder method)
update_blocked_status() (askomics.libaskomics.rdfdb.SparqlQueryBuilder.SparqlQueryBuilder method)
update_email() (askomics.libaskomics.Security.Security method)
update_list_prefix() (askomics.libaskomics.ParamManager.ParamManager method)
update_mail() (askomics.ask_view.AskView method)
(askomics.libaskomics.rdfdb.SparqlQueryAuth.SparqlQueryAuth method)
update_passwd() (askomics.ask_view.AskView method)
(askomics.libaskomics.Security.Security method)
(askomics.libaskomics.rdfdb.SparqlQueryAuth.SparqlQueryAuth method)
upload() (askomics.upload.FileUpload method)
upload_data() (askomics.libaskomics.rdfdb.QueryLauncher.QueryLauncher method)
upload_files() (askomics.libaskomics.GalaxyConnector.GalaxyConnector method)
upload_galaxy_file() (askomics.ask_view.AskView method)
uploadCsv() (askomics.ask_view.AskView method)
uploadTtl() (askomics.ask_view.AskView method)
V
validate() (askomics.upload.FileUpload method)
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v: 18.10
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